Although we had the bio qual, we still managed to do a little bit of work. One of the sources for our positive set was a little suspect, so we decided to take it out and see the impact on the results. We found that there was a drastic change. Since we were relatively confident that the other positives were good, if the suspect one was good, then the results wouldn’t change as much if we ran the whole network through. What we found was that it was indeed not very good. The output file was dramatically different. But we need a way to quantify the change<\/p>\n
This upcoming week, we will also be developing a program to find how conserved our output genes are in fruit flies, which are our model organism<\/p>\n","protected":false},"excerpt":{"rendered":"
Although we had the bio qual, we still managed to do a little bit of work. One of the sources for our positive set was a little suspect, so we decided to take it out and see the impact on the results. We found that there was a drastic change. Since we were relatively confident … Continue reading “Week 21”<\/span><\/a><\/p>\n","protected":false},"author":1584,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7,8,1],"tags":[],"class_list":["post-215","post","type-post","status-publish","format-standard","hentry","category-creu","category-schizophrenia","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/215","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/users\/1584"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/comments?post=215"}],"version-history":[{"count":1,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/215\/revisions"}],"predecessor-version":[{"id":216,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/215\/revisions\/216"}],"wp:attachment":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/media?parent=215"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/categories?post=215"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/tags?post=215"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}