{"id":241,"date":"2018-05-28T11:46:50","date_gmt":"2018-05-28T18:46:50","guid":{"rendered":"http:\/\/blogs.reed.edu\/compbio\/?p=241"},"modified":"2018-05-28T11:47:35","modified_gmt":"2018-05-28T18:47:35","slug":"week-1-2","status":"publish","type":"post","link":"https:\/\/blogs.reed.edu\/compbio\/2018\/05\/28\/week-1-2\/","title":{"rendered":"Week 1"},"content":{"rendered":"<p>Sol, Usman, and I have started working on summer research to modify the PathLinker algorithm.<\/p>\n<p>This week, we plan to finish the code implementing Dijkstra&#8217;s algorithm on toy datasets, which was used as a warmup exercise in order to acclimatize us back into working and coding. In addition, I&#8217;ve been assigned to understand <a href=\"http:\/\/people.csail.mit.edu\/minilek\/yen_kth_shortest.pdf\">Yen&#8217;s k-shortest paths algorithm<\/a>, which is one of the foundations of PathLinker.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Sol, Usman, and I have started working on summer research to modify the PathLinker algorithm. This week, we plan to finish the code implementing Dijkstra&#8217;s algorithm on toy datasets, which was used as a warmup exercise in order to acclimatize us back into working and coding. In addition, I&#8217;ve been assigned to understand Yen&#8217;s k-shortest &hellip; <a href=\"https:\/\/blogs.reed.edu\/compbio\/2018\/05\/28\/week-1-2\/\" class=\"more-link\">Continue reading<span class=\"screen-reader-text\"> &#8220;Week 1&#8221;<\/span><\/a><\/p>\n","protected":false},"author":1725,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[3,11,1],"tags":[],"class_list":["post-241","post","type-post","status-publish","format-standard","hentry","category-computer-science","category-summer-research-2018","category-uncategorized"],"_links":{"self":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/241","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/users\/1725"}],"replies":[{"embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/comments?post=241"}],"version-history":[{"count":1,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/241\/revisions"}],"predecessor-version":[{"id":256,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/posts\/241\/revisions\/256"}],"wp:attachment":[{"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/media?parent=241"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/categories?post=241"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/blogs.reed.edu\/compbio\/wp-json\/wp\/v2\/tags?post=241"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}